PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925510.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 439aa    MW: 49719.4 Da    PI: 7.7509
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925510.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.36.4e-36461881128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G++F+Ptd+el+ e+L++kv+g++      ++++   i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+          
  XP_010925510.1  46 LPAGVKFDPTDQELI-EHLEAKVKGEEsrshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtecdlqRG 138
                     799************.99********97776553333333666646**********.555666799******************75555554433 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_010925510.1 139 ETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 188
                     788************.999***********5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3741207IPR003441NAC domain
PROSITE profilePS5100532.50646207IPR003441NAC domain
PfamPF023652.6E-1647188IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MNRSNIGSVS SSDLIDAKLE EHRMCGSKQC PSCGHKLDRK PDWVGLPAGV KFDPTDQELI  60
EHLEAKVKGE ESRSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQRGET RWHKTGKTRP VMVNGRQKGC KKILVLYTNF GKHRKPEKTN  180
WVMHQYHLGE LEEEKEGELV VSKIFYQTQP RQCNWSDRSA AAAAGEGVRD RRRDSGSGSC  240
SSKEVVSQRD ELNSRAGISG YGALDIQQNM KPDNFSFAPF RKSFDEVGMG EAAPKAREEH  300
EEAEHHHALP QHQHHVTQKQ QHQQAAPTAA FHVSRPTNPI STIISPPPLH QTSVVLNDPY  360
HVSRLLLQAD KFQQQHQQQQ HQQLQQHQKL DHRSASGLEE LIMGCTSAGI RGETSVPHSQ  420
ETEWAPYTYW SPDNPDHHG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-134418813140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00460DAPTransfer from AT4G29230Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925507.10.0PREDICTED: uncharacterized protein LOC105048021
RefseqXP_010925508.10.0PREDICTED: uncharacterized protein LOC105048021
RefseqXP_010925509.10.0PREDICTED: uncharacterized protein LOC105048021
RefseqXP_010925510.10.0PREDICTED: uncharacterized protein LOC105048021
RefseqXP_010925511.10.0PREDICTED: uncharacterized protein LOC105048021
TrEMBLA5BJQ50.0A5BJQ5_VITVI; Putative uncharacterized protein
STRINGVIT_11s0016g02880.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-129NAC domain containing protein 75